PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011087257.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family TCP
Protein Properties Length: 397aa    MW: 42111.5 Da    PI: 8.9958
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011087257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP109.45.3e-34872342113
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++    Llqqa+pa++++tgt++++a+++  + s +ss+s+ s +       
  XP_011087257.1  87 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGE----LLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrsty 177
                     789******************************************....********************99987777777777555557777788 PP

             TCP  89 ...............................kaaksaa.kskksqksaasalnlake 113
                                                    +aa+ ++   + +q+  +++l+l + 
  XP_011087257.1 178 fnpnytmpqrrglfpgiglssesssttllnfQAANLNPsLMQAKQEMRENTLDLTET 234
                     888888999888899988765444444444422222222233333333333333332 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.4E-3591253IPR005333Transcription factor, TCP
PROSITE profilePS5136917.70293143IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MEGGDDHLHL HRHHHHHHHH HGRPNFPFQL LEKKEDESTS SAYPSLAISA DISSNPSTST  60
TPRSTTSASS SLQIAATTAA EPSKKPPPKR TSTKDRHTKV DGRGRRIRMP ALCAARVFQL  120
TRELGHKSDG ELLQQAEPAV IAATGTGTIP ANFTSLNISL RSSGSSMSVP SQLRSTYFNP  180
NYTMPQRRGL FPGIGLSSES SSTTLLNFQA ANLNPSLMQA KQEMRENTLD LTETEESLGR  240
KRRAEQELQQ PQHHQIGSYL LQSSAGAMPA SHASIPANFW MVANSNNNQV MGGDPIWTFP  300
SVNINNSSAA AAAALYRGTM SSGLHFMNFP APVALLPSQQ LGGGGGGGNG LGEGQLGMLA  360
GLNPYRTGGS GVSDSQASGS HGGGGGDDRH DAASHHS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087257.10.0PREDICTED: transcription factor TCP14-like
SwissprotQ93Z002e-65TCP14_ARATH; Transcription factor TCP14
TrEMBLA0A068UVP61e-166A0A068UVP6_COFCA; Uncharacterized protein
STRINGVIT_17s0000g06020.t011e-165(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28822351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.18e-44TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14